Fully automated downstream statistical analysis and visualisation tool for label-free quantitative proteomic data pre-processed with MaxQuant.
Published version can be found at ACS Publications, for discovering more features, please try the latest version.

Fully automated downstream statistical analysis and visualisation tool for phosphoproteomic datasets pre-processed with MaxQuant, and published at ACS Publications.

Downstream statistical analysis and visualisation tool for proteomic data pre-processed with FragPipe and other selected software packages developed in the Nesvizhskii Lab, as published at ACS Publications.
Visit Stable version for analysis, and the Development version with most recent updates and bug fixes.

Fully automated downstream statistical analysis and visualisation tool for TMT-labeled quantitative proteomic datasets pre-processed with Proteome Discoverer.

Downstream statistical analysis and visualisation tool for Data-Independent Acquisition label-free quantitative proteomic datasets pre-processed with Spectronaut and DIA-NN.

Pathway-Analyst provides functional enrichment analysis for proteomic (Analyst-Suites) or RNA datasets (Degust). It identifies pathways and processes linked to expression data, enhancing biological interpretation.